STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2232PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: noc:Noc_2795 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2. (170 aa)    
Predicted Functional Partners:
Mlg_2231
TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: tcx:Tcr_0972 sigma 54 modulation protein/ribosomal protein S30EA.
 
  
 0.959
Mlg_2234
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: sde:Sde_3182 HNH nuclease.
 
  
 0.955
Mlg_2233
PFAM: Uncharacterised P-loop ATPase protein UPF0042; KEGG: noc:Noc_2797 uncharacterized P-loop ATPase protein UPF0042.
  
  
 0.923
Mlg_2230
TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: pae:PA4462 RNA polymerase sigma-54 factor.
  
  
 0.857
Mlg_1177
Phosphoenolpyruvate--protein phosphotransferase; PFAM: PEP-utilizing enzyme; KEGG: cvi:CV0558 probable phosphoenolpyruvate-protein phosphotransferase.
 
   
 0.833
Mlg_0428
PTSINtr with GAF domain, PtsP; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: ppu:PP5145 phosphoenolpyruvate-protein phosphotransferase PtsP.
  
   
 0.807
Mlg_2229
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppu:PP0953 ABC transporter, ATP-binding protein, putative.
     
 0.593
Mlg_2225
KpsF/GutQ family protein; KEGG: noc:Noc_2788 sugar phosphate isomerase involved in capsule formation, KpsF/GutQ; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS).
  
  
 0.550
Mlg_2228
PFAM: OstA family protein; KEGG: tbd:Tbd_0535 OstA-like family protein.
  
  
 0.541
Mlg_2226
TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: bbr:BB4502 probable hydrolase.
       0.536
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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