node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mlg_0473 | Mlg_0474 | Mlg_0473 | Mlg_0474 | PFAM: ribosomal protein L6; KEGG: ppu:PP0469 ribosomal protein L6. | TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: csa:Csal_0437 ribosomal protein L18. | 0.999 |
Mlg_0473 | rplC | Mlg_0473 | Mlg_0458 | PFAM: ribosomal protein L6; KEGG: ppu:PP0469 ribosomal protein L6. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.999 |
Mlg_0473 | rplE | Mlg_0473 | Mlg_0470 | PFAM: ribosomal protein L6; KEGG: ppu:PP0469 ribosomal protein L6. | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.999 |
Mlg_0473 | rplJ | Mlg_0473 | Mlg_0449 | PFAM: ribosomal protein L6; KEGG: ppu:PP0469 ribosomal protein L6. | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.993 |
Mlg_0473 | rplM | Mlg_0473 | Mlg_2242 | PFAM: ribosomal protein L6; KEGG: ppu:PP0469 ribosomal protein L6. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.994 |
Mlg_0473 | rplO | Mlg_0473 | Mlg_0477 | PFAM: ribosomal protein L6; KEGG: ppu:PP0469 ribosomal protein L6. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.998 |
Mlg_0473 | rplP | Mlg_0473 | Mlg_0465 | PFAM: ribosomal protein L6; KEGG: ppu:PP0469 ribosomal protein L6. | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.998 |
Mlg_0473 | rplT | Mlg_0473 | Mlg_0765 | PFAM: ribosomal protein L6; KEGG: ppu:PP0469 ribosomal protein L6. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.981 |
Mlg_0473 | rplV | Mlg_0473 | Mlg_0463 | PFAM: ribosomal protein L6; KEGG: ppu:PP0469 ribosomal protein L6. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.997 |
Mlg_0473 | rpsI | Mlg_0473 | Mlg_2241 | PFAM: ribosomal protein L6; KEGG: ppu:PP0469 ribosomal protein L6. | PFAM: ribosomal protein S9; KEGG: ilo:IL0415 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.989 |
Mlg_0474 | Mlg_0473 | Mlg_0474 | Mlg_0473 | TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: csa:Csal_0437 ribosomal protein L18. | PFAM: ribosomal protein L6; KEGG: ppu:PP0469 ribosomal protein L6. | 0.999 |
Mlg_0474 | rplC | Mlg_0474 | Mlg_0458 | TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: csa:Csal_0437 ribosomal protein L18. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.997 |
Mlg_0474 | rplE | Mlg_0474 | Mlg_0470 | TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: csa:Csal_0437 ribosomal protein L18. | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.998 |
Mlg_0474 | rplJ | Mlg_0474 | Mlg_0449 | TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: csa:Csal_0437 ribosomal protein L18. | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.996 |
Mlg_0474 | rplM | Mlg_0474 | Mlg_2242 | TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: csa:Csal_0437 ribosomal protein L18. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.994 |
Mlg_0474 | rplO | Mlg_0474 | Mlg_0477 | TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: csa:Csal_0437 ribosomal protein L18. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
Mlg_0474 | rplP | Mlg_0474 | Mlg_0465 | TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: csa:Csal_0437 ribosomal protein L18. | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.997 |
Mlg_0474 | rplT | Mlg_0474 | Mlg_0765 | TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: csa:Csal_0437 ribosomal protein L18. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.987 |
Mlg_0474 | rplV | Mlg_0474 | Mlg_0463 | TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: csa:Csal_0437 ribosomal protein L18. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.998 |
Mlg_0474 | rpsI | Mlg_0474 | Mlg_2241 | TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: csa:Csal_0437 ribosomal protein L18. | PFAM: ribosomal protein S9; KEGG: ilo:IL0415 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.987 |