STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2332PFAM: glycosyl transferase, group 1; KEGG: csa:Csal_1715 glycosyl transferase, group 1. (375 aa)    
Predicted Functional Partners:
Mlg_2341
PFAM: glycosyl transferase, group 1; KEGG: csa:Csal_1721 glycosyl transferase, group 1.
 
     0.786
Mlg_2798
PFAM: glycosyl transferase, group 1; KEGG: ppu:PP4943 glycosyl transferase, putative.
  
     0.699
Mlg_0958
KEGG: noc:Noc_0904 glycogen branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; alpha amylase, C-terminal all-beta; SMART: alpha amylase, catalytic sub domain.
   
 0.568
Mlg_2365
PFAM: glycosyl transferase, group 1; KEGG: atc:AGR_L_2541 hypothetical protein.
  
     0.551
Mlg_2333
KEGG: sdn:Sden_2169 hypothetical protein.
       0.529
Mlg_0159
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: eba:ebA40 putative glycosyltransferase.
 
  
 0.515
Mlg_2339
KEGG: reu:Reut_B5373 asparagine synthase, glutamine-hydrolyzing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase.
 
    0.513
Mlg_2678
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: eba:ebA1639 predicted nucleoside-diphosphate-sugar epimerase.
 
    0.511
Mlg_0289
PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: mca:MCA2487 UDP-glucose 6-dehydrogenase.
 
  
 0.463
Mlg_2331
KEGG: neu:NE1571 hypothetical protein.
       0.448
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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