STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2359PFAM: Rieske [2Fe-2S] domain protein; KEGG: rpa:RPA0983 possible phthalate dioxygenase. (410 aa)    
Predicted Functional Partners:
Mlg_2360
KEGG: pmt:PMT0107 hypothetical protein.
       0.773
Mlg_2358
KEGG: ret:RHE_PE00036 putative glycosyltransferase protein.
       0.768
Mlg_2454
PFAM: Rieske [2Fe-2S] domain protein; KEGG: dar:Daro_1358 Rieske (2Fe-2S) region.
  
     0.709
Mlg_2458
Biphenyl-2,3-diol 1,2-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:bll5282 biphenyl-2,3-diol 1,2-dioxygenase.
 
  
 0.673
Mlg_2459
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: dar:Daro_1359 oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region.
 
  
 0.661
Mlg_2530
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mfa:Mfla_0031 oxidoreductase FAD/NAD(P)-binding.
 
  
 0.594
Mlg_2460
PFAM: Hydratase/decarboxylase; KEGG: bur:Bcep18194_B2961 4-oxalocrotonate decarboxylase.
 
   
 0.582
Mlg_2361
PFAM: isochorismatase hydrolase; aldehyde dehydrogenase; KEGG: bbr:BB0641 putative aldehyde dehydrogenase.
  
  
 0.537
Mlg_2362
PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: gvi:gll3551 3-isopropylmalate dehydrogenase.
       0.517
Mlg_2515
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll3759 similar to ABC transporter (binding protein).
  
  
 0.468
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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