STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2433TIGRFAM: biotin biosynthesis protein BioC; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: tbd:Tbd_0322 biotin biosynthesis protein BioC. (291 aa)    
Predicted Functional Partners:
Mlg_2434
Carboxylesterase BioH (pimeloyl-CoA synthesis); PFAM: alpha/beta hydrolase fold; KEGG: xcb:XC_0397 biotin biosynthesis protein.
  
 0.991
Mlg_2436
KEGG: xcv:XCV0403 biotin synthase BioB; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB.
 
  
 0.983
Mlg_2435
KEGG: mca:MCA1126 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase, class I and II.
 
  
 0.979
Mlg_0292
KEGG: pae:PA0504 dethiobiotin synthase; TIGRFAM: dethiobiotin synthase; PFAM: Cobyrinic acid a,c-diamide synthase.
 
  
 0.917
Mlg_1373
PFAM: beta-ketoacyl synthase; KEGG: pae:PA1609 beta-ketoacyl-ACP synthase I.
    
 0.900
Mlg_1419
3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: beta-ketoacyl synthase; KEGG: bte:BTH_I1721 3-oxoacyl-(acyl-carrier-protein) synthase II.
    
 0.900
Mlg_2524
PFAM: protein of unknown function DUF185; KEGG: dar:Daro_4140 protein of unknown function DUF185.
  
    0.682
Mlg_1824
PFAM: protein of unknown function DUF498; KEGG: cbu:CBU_0859 hypothetical protein.
  
     0.680
Mlg_1820
KEGG: cvi:CV2476 probable signal peptide protein.
  
     0.669
Mlg_0362
Aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: hch:HCH_01529 adenosylmethionine-8-amino-7-oxononanoate aminotransferase.
 
  
 0.617
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.