STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2460PFAM: Hydratase/decarboxylase; KEGG: bur:Bcep18194_B2961 4-oxalocrotonate decarboxylase. (260 aa)    
Predicted Functional Partners:
Mlg_2462
4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; DmpG communication domain protein; KEGG: rme:Rmet_1319 pyruvate carboxyltransferase.
 
 
 0.994
Mlg_2461
PFAM: Semialdehyde dehydrogenase, NAD - binding; KEGG: bur:Bcep18194_B2960 semialdehyde dehydrogenase, NAD - binding.
  
 0.987
Mlg_2456
2-hydroxymuconate semialdehyde hydrolase; PFAM: alpha/beta hydrolase fold; KEGG: dar:Daro_3786 alpha/beta hydrolase fold.
 
 
 0.986
Mlg_2458
Biphenyl-2,3-diol 1,2-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:bll5282 biphenyl-2,3-diol 1,2-dioxygenase.
 
   
 0.876
Mlg_2459
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: dar:Daro_1359 oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region.
 
   
 0.725
Mlg_2515
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll3759 similar to ABC transporter (binding protein).
  
  
 0.629
Mlg_2359
PFAM: Rieske [2Fe-2S] domain protein; KEGG: rpa:RPA0983 possible phthalate dioxygenase.
 
   
 0.582
Mlg_2463
(Acyl-carrier-protein) phosphodiesterase; PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: tcx:Tcr_2059 (acyl-carrier protein) phosphodiesterase.
       0.501
Mlg_2259
5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bbr:BB4132 putative enzyme.
  
  
 0.499
Mlg_0926
TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: noc:Noc_0174 chorismate mutase.
      
 0.470
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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