STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2461PFAM: Semialdehyde dehydrogenase, NAD - binding; KEGG: bur:Bcep18194_B2960 semialdehyde dehydrogenase, NAD - binding. (300 aa)    
Predicted Functional Partners:
Mlg_2462
4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; DmpG communication domain protein; KEGG: rme:Rmet_1319 pyruvate carboxyltransferase.
 0.999
Mlg_2460
PFAM: Hydratase/decarboxylase; KEGG: bur:Bcep18194_B2961 4-oxalocrotonate decarboxylase.
  
 0.987
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
 0.985
Mlg_2726
PFAM: aldehyde dehydrogenase; KEGG: gka:GK0730 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.912
Mlg_2378
PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: rpa:RPA4567 phosphate acetyltransferase.
    
 0.907
Mlg_0025
TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: sbo:SBO_3133 acetylCoA carboxylase, BccP subunit.
     
 0.903
Mlg_0688
KEGG: eba:ebA5202 putative thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase.
     
 0.903
Mlg_2110
KEGG: eca:ECA3079 putative 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase.
     
 0.903
Mlg_2125
KEGG: xcv:XCV2063 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase.
     
 0.903
Mlg_2706
KEGG: reu:Reut_B4738 thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase.
     
 0.903
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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