STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2485PFAM: alpha/beta hydrolase fold; KEGG: xcv:XCV2209 poly-beta-hydroxybutyrate polymerase. (363 aa)    
Predicted Functional Partners:
Mlg_2486
TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Acetoacetyl-CoA reductase; KEGG: hch:HCH_04996 acetoacetyl-CoA reductase.
  
 
 0.963
Mlg_2811
PFAM: MaoC domain protein dehydratase; KEGG: rru:Rru_A2964 MaoC-like dehydratase.
 
  
 0.923
Mlg_0994
TIGRFAM: acetoacetyl-CoA reductase; 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: btk:BT9727_1207 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-CoA reductase).
  
 
 0.914
Mlg_2111
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: ilo:IL0993 fatty oxidation complex, alpha subunit.
     
 0.914
Mlg_2484
Hypothetical protein; KEGG: xcb:XC_1958 PHA synthase subunit.
     
 0.797
Mlg_2487
TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: xac:XAC2402 hypothetical protein.
 
   
 0.782
Mlg_2483
PFAM: peptidase M48, Ste24p; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: noc:Noc_2619 peptidase M48, Ste24p.
       0.548
Mlg_2491
PFAM: Patatin; KEGG: bja:bll7964 hypothetical protein.
 
   
 0.478
Mlg_1769
PFAM: Patatin; KEGG: mlo:mll3840 hypothetical protein.
 
   
 0.433
Mlg_2482
PFAM: protein of unknown function UPF0118; KEGG: noc:Noc_0190 protein of unknown function UPF0118.
       0.403
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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