STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2666PFAM: Ankyrin; KEGG: xcv:XCV0710 hypothetical protein. (237 aa)    
Predicted Functional Partners:
Mlg_0223
Bis(5'nucleosyl)-tetraphosphatase, ApaH; KEGG: mca:MCA0159 bis(5'-nucleosyl)-tetraphosphatase, symmetrical; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); PFAM: metallophosphoesterase.
   
 0.949
Mlg_2512
NAD-dependent formate dehydrogenase flavoprotein subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: mca:MCA2577 dehydrogenase subunit, putative.
   
 0.869
Mlg_2807
PFAM: lipopolysaccharide kinase; KEGG: cps:CPS_0117 3-deoxy-D-manno-octulosonic acid kinase.
    
 0.863
Mlg_0672
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mac:MA1362 O-linked GlcNAc transferase.
 
 0.854
Mlg_2210
PFAM: Cytochrome b/b6, N-terminal domain; Cytochrome b/b6, C-terminal domain; KEGG: pae:PA4430 ubiquinol-cytochrome c reductase cytochrome b subunit.
    
 0.837
Mlg_0156
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: noc:Noc_1987 TPR repeat protein.
  
 0.796
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.793
rpsC
SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.770
Mlg_0828
PFAM: metallophosphoesterase; KEGG: sru:SRU_2007 Ser/Thr protein phosphatase family protein.
    
  0.753
Mlg_1460
PFAM: Tetratricopeptide TPR_2 repeat protein.
  
 0.753
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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