STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2707PFAM: UspA domain protein; KEGG: tko:TK2034 universal stress protein. (279 aa)    
Predicted Functional Partners:
Mlg_2708
KEGG: sru:SRU_2459 hypothetical protein.
       0.678
Mlg_2709
PFAM: Bile acid:sodium symporter; KEGG: sru:SRU_2460 hypothetical protein.
       0.678
Mlg_2710
Arsenite efflux ATP-binding protein ArsA; KEGG: rba:RB9551 ArsA-catalytic subunit of arsenic oxyanion-translocating ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase; TC 3.A.4.1.1.
       0.678
Mlg_2706
KEGG: reu:Reut_B4738 thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase.
       0.489
Mlg_0206
PFAM: UspA domain protein; KEGG: mbo:Mb2051c hypothetical protein.
  
     0.480
Mlg_2711
PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: mfa:Mfla_1492 arsenical resistance operon trans-acting repressor ArsD.
  
    0.466
Mlg_2712
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: gka:GK0589 arsenate reductase.
  
    0.402
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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