STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2728PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: csa:Csal_0094 TonB-dependent receptor. (688 aa)    
Predicted Functional Partners:
Mlg_0243
Cell division and transport-associated protein TolA; TIGRFAM: TonB family protein; PFAM: TolA family protein; KEGG: noc:Noc_0144 TonB-like; TC 2.C.1.2.1.
 
 
 0.795
Mlg_1845
Outer membrane transport energization protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: syn:slr1753 hypothetical protein; TC 2.C.1.1.1.
 
 
 0.791
Mlg_0350
Outer membrane transport energization protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: xac:XAC3104 TonB protein; TC 2.C.1.1.1.
  
 
 0.749
Mlg_1587
SMART: PDZ/DHR/GLGF domain protein; KEGG: nmu:Nmul_A2382 PDZ/DHR/GLGF.
 
  
 0.655
Mlg_2858
KEGG: hch:HCH_04240 uncharacterized protein with a C-terminal OMP (outer membrane protein) domain.
    
 
 0.596
Mlg_2727
PFAM: protein of unknown function DUF779; KEGG: bha:BH0680 hypothetical protein.
       0.582
Mlg_2820
PFAM: periplasmic binding protein; KEGG: eba:ebA3688 probable substrate-binding periplasmic (PBP) ABC transporter protein.
 
  
 0.563
Mlg_2822
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sde:Sde_3202 ATP-binding ABC transporter protein.
 
  
 0.553
Mlg_2724
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ccr:CC0139 TonB-dependent receptor.
  
  
 0.543
Mlg_2030
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: plt:Plut_1539 receptor, putative.
 
  
0.518
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.