STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2768TIGRFAM: conserved hypothetical protein; KEGG: sme:SMa2229 hypothetical protein. (189 aa)    
Predicted Functional Partners:
Mlg_2088
KEGG: pst:PSPTO0949 hypothetical protein.
  
     0.642
Mlg_1167
PFAM: Cupin 2, conserved barrel domain protein; KEGG: rru:Rru_A2000 hypothetical protein.
  
     0.616
Mlg_0494
KEGG: mlo:mlr9079 hypothetical protein.
  
     0.581
Mlg_1801
KEGG: cbu:CBU_1073 hypothetical protein.
  
     0.564
Mlg_1807
KEGG: psb:Psyr_3394 hypothetical protein.
  
     0.557
Mlg_0596
TIGRFAM: small GTP-binding protein; GTP-binding; PFAM: GTP-binding protein, HSR1-related; Miro domain protein; KEGG: vch:VC0763 GTP-binding protein.
   
    0.538
Mlg_2769
PFAM: NAD(P) transhydrogenase, beta subunit; KEGG: eba:ebA4500 pyridine nucleotide transhydrogenase subunit beta.
       0.494
Mlg_2770
KEGG: xoo:XOO3630 pyridine nucleotide transhydrogenase subunit alpha.
       0.494
Mlg_2771
NAD(P)(+) transhydrogenase (AB-specific); PFAM: alanine dehydrogenase/PNT domain protein; KEGG: eba:ebA4497 pyridine nucleotide transhydrogenase alpha subunit.
       0.494
Mlg_0486
KEGG: mag:amb4558 hypothetical protein.
  
     0.472
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.