STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2841Transketolase; KEGG: noc:Noc_2808 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region. (665 aa)    
Predicted Functional Partners:
Mlg_0221
TIGRFAM: transaldolase; PFAM: Transaldolase; KEGG: nha:Nham_3269 transaldolase.
 
 0.996
Mlg_2834
PFAM: ribulose-phosphate 3-epimerase; KEGG: pst:PSPTO0566 ribulose-phosphate 3-epimerase.
 0.993
Mlg_0290
PFAM: phosphoglucose isomerase (PGI); KEGG: pca:Pcar_2367 glucose-6-phosphate isomerase.
 
 0.962
Mlg_2844
KEGG: noc:Noc_2804 fructose-bisphosphate aldolase, class II, calvin cycle subtype; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase, class-II.
  
 
 0.960
Mlg_1972
PFAM: triosephosphate isomerase; KEGG: dar:Daro_0947 triosephosphate isomerase.
  
 0.947
Mlg_2843
PFAM: pyruvate kinase; KEGG: noc:Noc_2805 pyruvate kinase.
  
 0.947
Mlg_2636
PFAM: Inositol phosphatase/fructose-1,6-bisphosphatase; KEGG: rfr:Rfer_2704 inositol phosphatase/fructose-1,6-bisphosphatase.
  
 
 0.945
Mlg_2260
KEGG: bte:BTH_I1196 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase.
  
 0.942
Mlg_2840
KEGG: bte:BTH_I1196 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 0.942
Mlg_1514
KEGG: csa:Csal_1568 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase.
  
 0.939
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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