STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN69_1783Polysaccharide deacetylase. (339 aa)    
Predicted Functional Partners:
BN69_1782
Magnesium transporter; Acts as a magnesium transporter.
       0.585
BN69_1546
Putative bacteriophage receptor protein NfrB.
 
  
 0.584
BN69_0747
Ceramide glucosyltransferase.
  
  
 0.557
BN69_1200
Ceramide glucosyltransferase.
  
  
 0.557
BN69_1781
Glycoside hydrolase family 25.
     
 0.520
BN69_0614
Glycosyl transferase family 2.
  
  
 0.517
BN69_0746
Glycosyl transferase family 2.
  
  
 0.517
BN69_1682
Hopene-associated glycosyltransferase HpnB.
  
  
 0.517
BN69_2480
Phosphoglycerol transferase I.
  
  
 0.517
BN69_2364
Sugar transferase.
 
   
 0.459
Your Current Organism:
Methylocystis sp. SC2
NCBI taxonomy Id: 187303
Other names: M. sp. SC2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.