Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BN69_1950Methylmalonyl-CoA mutase, large subunit. (659 aa)    
Predicted Functional Partners:
BN69_3344
Methylmalonyl-CoA mutase, large subunit.
 
 
0.984
BN69_1209
Methylmalonyl-CoA epimerase.
 
  
 0.980
BN69_1942
Acyl-CoA dehydrogenase domain-containing protein.
 
 
 0.955
BN69_0753
Methylmalonyl-CoA mutase.
 
 
0.866
BN69_1948
Crotonyl-CoA reductase.
 
   
 0.855
BN69_2035
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.688
BN69_0351
MaoC domain protein dehydratase.
 
  
 0.685
BN69_0774
Carboxyl transferase.
 
  
 0.668
BN69_3356
3-hydroxyacyl-CoA dehydrogenase NAD-binding.
     
 0.575
BN69_0552
AMP-dependent synthetase and ligase.
 
   
 0.545
Your Current Organism:
Methylocystis sp. SC2
NCBI taxonomy Id: 187303
Other names: M. sp. SC2
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