Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BN69_2467Response regulator receiver and ANTAR domain protein. (222 aa)    
Predicted Functional Partners:
BN69_2468
Nitrate transporter component, NrtA.
 
  
 0.970
nasA
Nitrate reductase, large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.908
nasD
Nitrite reductase [NAD(P)H], large subunit.
 
  
 0.905
BN69_2466
Putative alpha amylase domain-containing protein.
     
 0.778
BN69_1420
Extracellular ligand-binding receptor.
 
 
 0.766
BN69_2474
Protein serine/threonine phosphatase.
 
  
 0.758
BN69_0174
Putative Cytochrome c.
  
 
 0.693
BN69_0354
Conserved hypothetical protein.
  
 
 0.693
BN69_0595
Conserved hypothetical protein.
  
 
 0.693
BN69_3246
Extracellular ligand-binding receptor.
  
 
 0.693
Your Current Organism:
Methylocystis sp. SC2
NCBI taxonomy Id: 187303
Other names: M. sp. SC2
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