Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BN69_3532Acid phosphatase. (479 aa)    
Predicted Functional Partners:
BN69_1978
Iron permease FTR1.
 
     0.547
BN69_3531
Cytochrome-c peroxidase.
       0.518
BN69_1310
Transcriptional regulator, MarR family.
  
     0.517
BN69_1979
Conserved hypothetical protein.
  
     0.510
ppnK
Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
     
  0.500
BN69_2513
Di-heme cytochrome c peroxidase.
 
     0.428
BN69_1562
Putative membrane protein.
  
     0.421
BN69_2967
High-affinity nickel-transporter; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.416
Your Current Organism:
Methylocystis sp. SC2
NCBI taxonomy Id: 187303
Other names: M. sp. SC2
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