STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPH94844.1Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)    
Predicted Functional Partners:
KPH94902.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
KPH94843.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.764
rraA
Regulator of ribonuclease activity A; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.
       0.750
KPH94846.1
Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
       0.750
KPH95584.1
Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.663
KPH95586.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.663
KPH92803.1
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
KPH95789.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.509
KPH95671.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.509
KPH95587.1
Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.500
Your Current Organism:
Pseudoalteromonas porphyrae
NCBI taxonomy Id: 187330
Other names: P. porphyrae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.