Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPH92789.1 | KPH93751.1 | AMS58_20785 | AMS58_15290 | Hemolysin-type calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
KPH93751.1 | KPH92789.1 | AMS58_15290 | AMS58_20785 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hemolysin-type calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
KPH93751.1 | KPH94635.1 | AMS58_15290 | AMS58_11130 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hemolysin-type calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.401 |
KPH93751.1 | KPH95400.1 | AMS58_15290 | AMS58_06655 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fructose-1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.451 |
KPH93751.1 | KPH95708.1 | AMS58_15290 | AMS58_05840 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.532 |
KPH93751.1 | KPH96348.1 | AMS58_15290 | AMS58_01965 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.458 |
KPH93751.1 | aroE | AMS58_15290 | AMS58_18825 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.435 |
KPH93751.1 | pdxJ | AMS58_15290 | AMS58_12670 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.586 |
KPH94635.1 | KPH93751.1 | AMS58_11130 | AMS58_15290 | Hemolysin-type calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.401 |
KPH95400.1 | KPH93751.1 | AMS58_06655 | AMS58_15290 | Fructose-1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.451 |
KPH95708.1 | KPH93751.1 | AMS58_05840 | AMS58_15290 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.532 |
KPH96348.1 | KPH93751.1 | AMS58_01965 | AMS58_15290 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.458 |
aroE | KPH93751.1 | AMS58_18825 | AMS58_15290 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.435 |
pdxJ | KPH93751.1 | AMS58_12670 | AMS58_15290 | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.586 |