STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPH92971.1Glutamyl endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (814 aa)    
Predicted Functional Partners:
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
  0.580
KPH95863.1
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.567
KPH92972.1
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.567
KPH92973.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.566
gltB
Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.557
KPH95100.1
Adenylosuccinate lyase; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.540
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
    
  0.534
KPH96248.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.530
KPH95323.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.530
KPH95138.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.530
Your Current Organism:
Pseudoalteromonas porphyrae
NCBI taxonomy Id: 187330
Other names: P. porphyrae
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