STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900098805_00572Unannotated protein. (496 aa)    
Predicted Functional Partners:
GCA_900098805_00512
Unannotated protein.
  
  
 0.734
GCA_900098805_02358
Unannotated protein.
   
 0.716
GCA_900098805_00573
Unannotated protein.
       0.639
GCA_900098805_00574
Unannotated protein.
       0.639
pnp
Unannotated protein; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
  
 0.594
GCA_900098805_00571
Unannotated protein.
    
  0.584
GCA_900098805_02813
Unannotated protein.
 
 
   0.583
rpsF
Unannotated protein; Binds together with S18 to 16S ribosomal RNA.
   
 
 0.572
GCA_900098805_01434
Unannotated protein.
    
 
 0.570
rplK
Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.559
Your Current Organism:
Microbacteriaceae bacterium
NCBI taxonomy Id: 1873462
Other names: M. bacterium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.