STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900098805_01101Unannotated protein. (212 aa)    
Predicted Functional Partners:
GCA_900098805_01102
Unannotated protein.
 
 0.981
GCA_900098805_02091
Unannotated protein.
 0.944
GCA_900098805_01104
Unannotated protein.
 
 
 0.937
GCA_900098805_01398
Unannotated protein.
  
 0.912
GCA_900098805_02093
Unannotated protein.
 
 
 0.825
GCA_900098805_01400
Unannotated protein.
  
 
 0.764
GCA_900098805_01103
Unannotated protein.
 
 
  0.740
GCA_900098805_01105
Unannotated protein.
 
 
 0.714
GCA_900098805_02025
Unannotated protein.
 
     0.624
rpsE
Unannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.612
Your Current Organism:
Microbacteriaceae bacterium
NCBI taxonomy Id: 1873462
Other names: M. bacterium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.