STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900098805_01461Unannotated protein. (372 aa)    
Predicted Functional Partners:
GCA_900098805_01550
Unannotated protein.
   
 0.904
rpoA
Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.871
GCA_900098805_00110
Unannotated protein.
  
 0.865
dnaK
Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.865
GCA_900098805_00231
Unannotated protein.
   
 0.861
GCA_900098805_01276
Unannotated protein.
   
 0.861
rpoZ
Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
  0.858
rpoB
Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.858
GCA_900098805_00426
Unannotated protein.
  
 0.857
GCA_900098805_00575
Unannotated protein.
  
 0.857
Your Current Organism:
Microbacteriaceae bacterium
NCBI taxonomy Id: 1873462
Other names: M. bacterium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.