STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900098805_02332Unannotated protein. (440 aa)    
Predicted Functional Partners:
GCA_900098805_02340
Unannotated protein.
 
  
  0.968
GCA_900098805_02334
Unannotated protein.
    0.914
GCA_900098805_02335
Unannotated protein.
 
     0.893
upp
Unannotated protein; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 
 0.886
EPN48_00280
Unannotated protein.
    
 0.875
GCA_900098805_02333
Unannotated protein.
 
     0.873
EPN48_00320
Unannotated protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.872
GCA_900098805_02330
Unannotated protein.
 
  
  0.848
GCA_900098805_01148
Unannotated protein.
    
 0.809
GCA_900098805_02969
Unannotated protein.
    
  0.779
Your Current Organism:
Microbacteriaceae bacterium
NCBI taxonomy Id: 1873462
Other names: M. bacterium
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