STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900098805_02447Unannotated protein. (354 aa)    
Predicted Functional Partners:
GCA_900098805_02485
Unannotated protein.
 
 0.959
lexA
Unannotated protein; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
 
 0.914
GCA_900098805_02847
Unannotated protein.
   
 0.875
GCA_900098805_01038
Unannotated protein.
   
 0.868
recA
Unannotated protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 0.829
GCA_900098805_01776
Unannotated protein.
  
 
 0.717
GCA_900098805_02054
Unannotated protein.
  
  
 0.710
GCA_900098805_02866
Unannotated protein.
   
 
 0.709
GCA_900098805_00275
Unannotated protein.
  
 
   0.655
GCA_900098805_02288
Unannotated protein.
  
 
 0.630
Your Current Organism:
Microbacteriaceae bacterium
NCBI taxonomy Id: 1873462
Other names: M. bacterium
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.