STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKP03922.1Holin. (105 aa)    
Predicted Functional Partners:
OKP03920.1
Head protein.
       0.773
OKP03921.1
Tail protein X.
       0.773
OKP03923.1
Structural protein.
       0.773
OKP03925.1
Lysis protein.
  
    0.767
OKP03924.1
Hypothetical protein.
       0.752
OKP03926.1
Tail protein.
       0.752
OKP03927.1
Tail protein.
       0.752
OKP03932.1
Phage tail protein.
  
    0.567
OKP03928.1
Baseplate assembly protein.
       0.562
OKP03929.1
Baseplate assembly protein.
       0.562
Your Current Organism:
Xenorhabdus eapokensis
NCBI taxonomy Id: 1873482
Other names: CCM 8728, LMG 29917, LMG:29917, X. eapokensis, Xenorhabdus eapokensis Kampfer et al. 2017, Xenorhabdus sp. DL20, strain DL20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.