STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKP01237.1Putative glycosyl transferase. (387 aa)    
Predicted Functional Partners:
OKP01236.1
Paerucumarin biosynthesis protein PvcB.
 
  
  0.858
OKP01235.1
Paerucumarin biosynthesis protein PvcA.
 
     0.807
OKP03619.1
Fatty acid desaturase.
 
  
 0.727
OKP05525.1
Amino acid adenylation.
 
  
 0.664
OKP02064.1
PlcA.
  
  
 0.659
OKP03459.1
2,3-dihydro-2,3-dihydroxybenzoate synthetase.
   
  
 0.533
OKP02972.1
Phenazine biosynthesis protein PhzD.
   
  
 0.533
murG_1
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
    
  0.520
murG_2
UDP-N-acetylglucosamine--N-acetylmuramyl- pyrophosphoryl-undecaprenol N-acetylglucosamine transferase.
    
  0.520
OKP00089.1
Amino acid adenylation.
 
   
 0.505
Your Current Organism:
Xenorhabdus eapokensis
NCBI taxonomy Id: 1873482
Other names: CCM 8728, LMG 29917, LMG:29917, X. eapokensis, Xenorhabdus eapokensis Kampfer et al. 2017, Xenorhabdus sp. DL20, strain DL20
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