STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
murDUDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)    
Predicted Functional Partners:
OCP10579.1
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
OCP10576.1
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
OCP10577.1
phospho-N-acetylmuramoyl-pentapeptide- transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
OCP10575.1
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
OCP10580.1
UDP-N-acetylmuramate--L-alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.993
OCP10584.1
D-alanine--D-alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.984
OCP10829.1
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.979
OCP04429.1
D-alanine--D-alanine ligase A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.974
OCP10581.1
UDP-N-acetylenolpyruvoylglucosamine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.954
OCP10585.1
Cell division protein FtsQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.952
Your Current Organism:
Ensifer sp. LC11
NCBI taxonomy Id: 1873712
Other names: E. sp. LC11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.