STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCP05798.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (682 aa)    
Predicted Functional Partners:
OCP12357.1
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.953
OCP12424.1
L-rhamnose catabolism isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.926
OCP12431.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.914
OCP04269.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.857
OCP00170.1
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.824
OCP06351.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.824
OCP03298.1
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.819
OCP07565.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.806
OCP00068.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.800
OCP11292.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.800
Your Current Organism:
Ensifer sp. LC11
NCBI taxonomy Id: 1873712
Other names: E. sp. LC11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.