STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCP13042.1methionyl-tRNA formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)    
Predicted Functional Partners:
OCP03225.1
N utilization substance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.869
OCP08678.1
Bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.826
OCP07523.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.826
OCP02243.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.826
OCP06358.1
Bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.823
OCP13470.1
Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.746
OCP13047.1
NarL family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.741
OCP13041.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.739
OCP10638.1
Thymidylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.732
OCP01894.1
Family 2 glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.718
Your Current Organism:
Ensifer sp. LC11
NCBI taxonomy Id: 1873712
Other names: E. sp. LC11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.