STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCP07889.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)    
Predicted Functional Partners:
OCP12635.1
DNA gyrase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.766
OCP05370.1
DNA topoisomerase IV subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.766
OCP00956.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.750
OCP14501.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.720
OCP11204.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.707
OCP07160.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.672
OCP14288.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.668
OCP08775.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.661
OCP14832.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.641
OCP10620.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.641
Your Current Organism:
Ensifer sp. LC11
NCBI taxonomy Id: 1873712
Other names: E. sp. LC11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.