STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCP07320.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)    
Predicted Functional Partners:
OCP03208.1
Undecaprenyl-phosphate glucose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.848
OCP13769.1
Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.734
OCP14487.1
Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.732
BBX50_10425
Transposase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.724
OCP00161.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.704
OCP10696.1
Pyridoxine 5'-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.697
OCP07319.1
Purine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.644
OCP13470.1
Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.608
OCP07321.1
glycine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.543
OCP13073.1
Kynureninase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.512
Your Current Organism:
Ensifer sp. LC11
NCBI taxonomy Id: 1873712
Other names: E. sp. LC11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.