STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_1184Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:g1197456 LN:ECU47048, p()=0.997, pid=14%. (71 aa)    
Predicted Functional Partners:
MTH_1183
Pheromone shutdown protein TraB; Function Code:12.12 - Cell Processes, Broad regulatory functions; similar to, pir:LN:D64470 AC:D64470, p()=4.6E-29, pid=35%.
       0.876
MTH_1185
Translation elongation factor, EF-1 alpha related protein; Function Code:10.08 - Metabolism of Macromolecules, Protein translation and modification; similar to, gp:GI:g1916927 LN:MMU87965, p()=1.1E-68, pid=30%.
       0.779
comB
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:C64442 AC:C64442, p()=1.4E-20, pid=31%.
       0.595
MTH_1180
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, sp:LN:Y094_METJA AC:Q57559, p()=9.5E-93, pid=53%.
       0.480
MTH_1181
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:g161163, p()=0.57, pid=21%.
       0.480
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.