STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_124Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:S68198 AC:S68198, p()=0.00000033, pid=15%. (314 aa)    
Predicted Functional Partners:
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
   
 
 0.938
MTH_1807
Phytoene dehydrogenase; Function Code:9.14 - Metabolism of Cofactors and Vitamins, Terpenoid biosynthesis (isomeric hydrocarbon ((C5H8)n); similar to, sp:LN:CRTJ_MYXXA AC:P54979, p()=4.7E-68, pid=31%.
 
  
 0.721
MTH_1808
Phytoene synthase; Function Code:9.14 - Metabolism of Cofactors and Vitamins, Terpenoid biosynthesis (isomeric hydrocarbon ((C5H8)n); similar to, gp:GI:g1928932 LN:MMU92075, p()=1E-24, pid=29%.
 
  
 0.657
phr
DNA deoxyribodipyrimidine photolyase (photoreactivation); Involved in repair of UV radiation-induced DNA damage. Catalyzes the light-dependent monomerization (300-600 nm) of cyclobutyl pyrimidine dimers (in cis-syn configuration), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation; Belongs to the DNA photolyase class-2 family.
 
    0.571
MTH_123
Sensory transduction histidine kinase; Function Code:12.12 - Cell Processes, Broad regulatory functions; similar to, gp:GI:g1652472 LN:D90905, p()=2.1E-31, pid=21%.
     
 0.559
MTH_125
Unknown; Function Code:14.00 - Unknown.
       0.534
MTH_1810
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:g1653202 LN:D90911, p()=3.1E-16, pid=21%.
 
   
 0.530
MTH_1895
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:g1652365 LN:D90905, p()=9.8E-41, pid=35%.
 
  
 0.416
gpsA
Glycerol-3-phosphate dehydrogenase (NAD); Function Code:8.01 - Metabolism of Complex Lipids, Glycerolipid metabolism; similar to, sp:LN:GPDA_BACSU AC:P46919, p()=3.5E-31, pid=30%; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
   
 0.400
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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