STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_1281Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:C64464 AC:C64464, p()=0.00000051, pid=27%; Belongs to the UPF0248 family. (81 aa)    
Predicted Functional Partners:
MTH_1282
Inosine-5'-monophosphate dehydrogenase related protein VI; Function Code:4.01 - Nucleotide Metabolism, Purine metabolism; similar to, sp:LN:Y188_METJA AC:Q57647, p()=1.7E-61, pid=41%.
  
    0.827
hisE
phosphoribosyl-AMP cyclohydrolase homolog; Function Code:5.10 - Histidine metabolism; similar to, sp:LN:Y302_METJA AC:Q57750, p()=0.0000022, pid=27%.
       0.794
gatB
PET112-like protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
       0.781
MTH_1278
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:E64374 AC:E64374, p()=1.3E-22, pid=32%.
       0.617
MTH_1279
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:E64374 AC:E64374, p()=8.3E-46, pid=35%.
       0.617
MTH_1267
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, sp:LN:Y888_METJA AC:Q58298, p()=2.5E-14, pid=26%.
       0.436
MTH_233
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:E64497 AC:E64497, p()=8.6E-44, pid=36%.
       0.432
MTH_1277
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:g152905, p()=0.0043, pid=10%.
       0.401
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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