STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_1717Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:g1707007 LN:ATU78721, p()=0.81, pid=06%. (557 aa)    
Predicted Functional Partners:
MTH_1716
Unknown; Function Code:14.00 - Unknown; similar to, pir:LN:S33341 AC:S33341, p()=0.9, pid=07%.
      0.950
MTH_1718
Bacteriochlorophyll synthase 43 kDa subunit; Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3- diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di- O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains.
       0.642
MTH_1719
Unknown (contains ferredoxin domain); Function Code:14.00 - Unknown; similar to, gp:GI:g945400, p()=0.00077, pid=18%.
       0.631
MTH_1826
Unknown (contains ferredoxin domain); Function Code:14.00 - Unknown; similar to, pir:LN:A42960 AC:A42960, p()=0.0045, pid=08%.
   
    0.589
MTH_1715
Phycocyanin alpha phycocyanobilin lyase CpcE related protein; Function Code:9.10 - Metabolism of Cofactors and Vitamins, Porphyrin and chlorophyll metabolism; similar to, gp:GI:e266604:g1546897, p()=0.000000035, pid=11%.
       0.563
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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