STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_186Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:g666026, p()=0.87, pid=21%. (60 aa)    
Predicted Functional Partners:
MTH_185
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:g1001351, p()=1E-10, pid=81%.
       0.686
MTH_187
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:g1651830 LN:D90900, p()=1.6E-12, pid=82%.
       0.481
MTH_184
Isocitrate dehydrogenase; Function Code:1.02 - Carbohydrate Metabolism, Citrate cycle (TCA cycle); similar to, pir:LN:H64389 AC:H64389, p()=1.5E-78, pid=50%.
       0.480
mdh
Lactate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
       0.469
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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