STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nob1Conserved protein; Toxic component of a type II toxin-antitoxin (TA) system. Processes pre-16S-rRNA at its 3' end (the D-site) to yield the mature 3' end (By similarity); Belongs to the PINc/VapC protein family. (171 aa)    
Predicted Functional Partners:
MTH_1005
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, sp:LN:Y444_METJA AC:Q57886, p()=3.9E-48, pid=41%.
   
 0.976
rps3ae
Ribosomal protein S3a; Function Code:10.04 - Metabolism of Macromolecules, Ribosomal proteins; similar to, sp:LN:RS3A_METJA AC:P54059, p()=4.7E-36, pid=39%; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.975
rps11
Ribosomal protein S14 (E.coli); Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
   
 0.973
rps7
Ribosomal protein S5 (E.coli); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.
   
 0.972
rps19
Ribosomal protein S15 (E.coli); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
    
 0.972
rps17e
Ribosomal protein S17; Function Code:10.04 - Metabolism of Macromolecules, Ribosomal proteins; similar to, sp:LN:R17E_METJA AC:P54026, p()=3.3E-12, pid=46%; Belongs to the eukaryotic ribosomal protein eS17 family.
    
  0.972
rps24e
Ribosomal protein S24; Function Code:10.04 - Metabolism of Macromolecules, Ribosomal proteins; similar to, sp:LN:RS24_HALMA AC:P19953, p()=0.00000001, pid=21%; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.970
rps28e
Ribosomal protein S28; Function Code:10.04 - Metabolism of Macromolecules, Ribosomal proteins; similar to, sp:LN:RS28_METJA AC:P54065, p()=6.4E-16, pid=43%; Belongs to the eukaryotic ribosomal protein eS28 family.
    
 0.969
rps19e
Ribosomal protein S19; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.
  
 
 0.968
rps2
Ribosomal protein Sa (E.coli); Function Code:10.04 - Metabolism of Macromolecules, Ribosomal proteins; similar to, sp:LN:RS2_METJA AC:P54109, p()=2.7E-63, pid=57%; Belongs to the universal ribosomal protein uS2 family.
   
 0.968
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.