STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_281Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp_new:GI:e316080:g2104411, p()=4.3E-10, pid=21%. (124 aa)    
Predicted Functional Partners:
MTH_280
Coenzyme F420-reducing hydrogenase, beta subunit homolog; Function Code:2.02 - Energy Metabolism, Methane metabolism; similar to, pir:LN:F64408 AC:F64408, p()=4.3E-223, pid=55%.
       0.780
MTH_1093
ABC transporter (ATP-binding; Daunorubicin resistance); Function Code:12.02 - Cell Processes, Transport of carbohydrates organic acids alcohols and lipids; similar to, gp:GI:e283950:g1707742, p()=3.3E-67, pid=31%.
  
  
 0.429
MTH_1370
ABC transporter (ATP-binding protein); Function Code:12.02 - Cell Processes, Transport of carbohydrates organic acids alcohols and lipids; similar to, gp:GI:g1001733, p()=2.2E-52, pid=33%.
  
  
 0.429
MTH_1487
ABC transporter (ATP-binding; Daunorubicin resistance); Function Code:12.02 - Cell Processes, Transport of carbohydrates organic acids alcohols and lipids; similar to, gp:GI:e283950:g1707742, p()=4.7E-52, pid=38%.
  
  
 0.429
MTH_282
Unknown; Function Code:14.00 - Unknown; similar to, sp:LN:YPGR_BACSU AC:P54169, p()=0.39, pid=07%.
       0.419
MTH_1488
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:g1789452 LN:ECAE000389, p()=0.0052, pid=17%.
  
     0.414
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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