STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_303Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, sp:LN:IAP_ECOLI AC:P10423, p()=3.9E-09, pid=13%. (345 aa)    
Predicted Functional Partners:
MTH_1903
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:e284341:g1771850, p()=0.00029, pid=17%.
  
 0.821
MTH_1639
Cell division control protein Cdc48; Function Code:12.07 - Cell Processes, Cell division; similar to, pir:LN:C64444 AC:C64444, p()=7.7E-233, pid=83%.
    
 0.750
MTH_158
Ferritin like protein (RsgA); Function Code:12.05 - Cell Processes, Transport of cations; similar to, sp:LN:FTN2_HAEIN AC:P43708, p()=5.8E-22, pid=31%.
   
 0.688
MTH_959
ATP synthase, subunit K; Function Code:2.01 - Energy Metabolism, Oxidative phosphorylation; similar to, sp:LN:ATPL_METJA AC:Q57674, p()=4E-19, pid=68%; Belongs to the V-ATPase proteolipid subunit family.
 
  
 0.668
atpE
ATP synthase, subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.665
atpF
ATP synthase, subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.661
atpD
ATP synthase, subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 0.647
atpC
ATP synthase, subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.645
atpB
ATP synthase, subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
   
 0.641
atpA
ATP synthase, subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family.
  
 0.621
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.