STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_314Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:E64388 AC:E64388, p()=7.6E-31, pid=19%. (452 aa)    
Predicted Functional Partners:
MTH_313
Transcriptional regulator; Function Code:10.02 - Metabolism of Macromolecules, Transcription--mRNA synthesis and modification (includes regulators); similar to, sp:LN:YYBA_BACSU AC:P37503, p()=2.2E-13, pid=25%.
 
  
 0.877
tbp
TATA-binding transcription initiation factor; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation (By similarity).
   
  
 0.868
MTH_1808
Phytoene synthase; Function Code:9.14 - Metabolism of Cofactors and Vitamins, Terpenoid biosynthesis (isomeric hydrocarbon ((C5H8)n); similar to, gp:GI:g1928932 LN:MMU92075, p()=1E-24, pid=29%.
  
 
 0.828
gap
Glyceraldehyde 3-phosphate dehydrogenase; Function Code:1.01 - Carbohydrate Metabolism, Glycolysis--Gluconeogenesis; similar to, pir:LN:S02804 AC:S02804, p()=7.6E-139, pid=76%.
  
  
 0.802
rpl13/rps9
Ribosomal protein S16 (E.coli); L13 protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (By similarity).
   
 
 0.799
MTH_1093
ABC transporter (ATP-binding; Daunorubicin resistance); Function Code:12.02 - Cell Processes, Transport of carbohydrates organic acids alcohols and lipids; similar to, gp:GI:e283950:g1707742, p()=3.3E-67, pid=31%.
  
  
 0.691
MTH_1370
ABC transporter (ATP-binding protein); Function Code:12.02 - Cell Processes, Transport of carbohydrates organic acids alcohols and lipids; similar to, gp:GI:g1001733, p()=2.2E-52, pid=33%.
  
  
 0.691
MTH_1487
ABC transporter (ATP-binding; Daunorubicin resistance); Function Code:12.02 - Cell Processes, Transport of carbohydrates organic acids alcohols and lipids; similar to, gp:GI:e283950:g1707742, p()=4.7E-52, pid=38%.
  
  
 0.691
MTH_1092
Putative membrane protein; Function Code:12.11 - Cell Processes, Detoxification; similar to, sp:LN:YC38_CYAPA AC:P48278, p()=6.5E-23, pid=26%.
  
  
 0.617
MTH_312
ATP-dependent helicase; Function Code:10.02 - Metabolism of Macromolecules, Transcription--mRNA synthesis and modification (includes regulators); similar to, gp:GI:e283825:g1707782, p()=3E-34, pid=27%.
     
 0.608
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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