STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTH_337Unknown; Function Code:14.00 - Unknown. (301 aa)    
Predicted Functional Partners:
MTH_332
LPS biosynthesis RfbU related protein; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, pir:LN:H64446 AC:H64446, p()=4.5E-18, pid=22%.
       0.773
gmd
GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
       0.773
MTH_334
Perosamine synthetase; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, gp:GI:g1911763 LN:S83460, p()=3.8E-89, pid=45%; Belongs to the DegT/DnrJ/EryC1 family.
       0.773
MTH_335
Galactosyl-transferase RfpB related protein; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, pir:LN:H64446 AC:H64446, p()=2.9E-15, pid=16%.
       0.773
MTH_336
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:F64450 AC:F64450, p()=0.00066, pid=17%.
       0.773
MTH_331
Mannosyltransferase; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, gp:GI:g1652563 LN:D90906, p()=2.5E-16, pid=24%.
       0.503
MTH_338
LPS biosynthesis RfbU related protein; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, sp:LN:YC08_KLEPN AC:Q48454, p()=4E-30, pid=23%.
       0.449
MTH_339
Unknown; Function Code:14.00 - Unknown; similar to, sp:LN:YHDT_ECOLI AC:P45566, p()=0.7, pid=03%.
       0.449
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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