STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_338LPS biosynthesis RfbU related protein; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, sp:LN:YC08_KLEPN AC:Q48454, p()=4E-30, pid=23%. (350 aa)    
Predicted Functional Partners:
MTH_354
Unknown; Function Code:14.00 - Unknown; similar to, sp:LN:YEII_ECOLI AC:P33020, p()=0.46, pid=15%.
  
 
 0.784
MTH_339
Unknown; Function Code:14.00 - Unknown; similar to, sp:LN:YHDT_ECOLI AC:P45566, p()=0.7, pid=03%.
       0.780
MTH_334
Perosamine synthetase; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, gp:GI:g1911763 LN:S83460, p()=3.8E-89, pid=45%; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.625
gmd
GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.619
MTH_344
UDP-galactopyranose mutase; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, sp:LN:GLF_MYCPN AC:P75499, p()=3.3E-51, pid=32%.
  
  
 0.597
MTH_331
Mannosyltransferase; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, gp:GI:g1652563 LN:D90906, p()=2.5E-16, pid=24%.
 
  
 0.590
MTH_379
O-antigen transporter related protein; Function Code:4.03 - Nucleotide Metabolism, Nucleotide sugars metabolism; similar to, gp:GI:g1314563 LN:SSU51197, p()=7.5E-18, pid=20%.
 
  
 0.586
MTH_335
Galactosyl-transferase RfpB related protein; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, pir:LN:H64446 AC:H64446, p()=2.9E-15, pid=16%.
 
    
0.584
MTH_1634
Transcriptional control factor (enhancer-binding protein); Function Code:10.02 - Metabolism of Macromolecules, Transcription--mRNA synthesis and modification (includes regulators); similar to, sp:LN:Y104_METJA AC:Q57568, p()=7.5E-132, pid=41%.
   
 
 0.576
MTH_340
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, sp:LN:AMSJ_ERWAM AC:Q46637, p()=1.2E-11, pid=14%.
  
  
 0.570
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.