STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_340Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, sp:LN:AMSJ_ERWAM AC:Q46637, p()=1.2E-11, pid=14%. (400 aa)    
Predicted Functional Partners:
MTH_341
Coenzyme F420-reducing hydrogenase, beta subunit homolog; Function Code:2.02 - Energy Metabolism, Methane metabolism; similar to, pir:LN:D35620 AC:D35620, p()=1.8E-21, pid=19%.
     0.841
gmd
GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.695
MTH_1176
Nucleotide-binding protein (putative ATPase); Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.587
MTH_338
LPS biosynthesis RfbU related protein; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, sp:LN:YC08_KLEPN AC:Q48454, p()=4E-30, pid=23%.
  
  
 0.570
MTH_272
Acetyl / acyl transferase related protein; Function Code:3.01 - Lipid metabolism, Fatty acid biosynthesis; similar to, gp:GI:g992972, p()=2E-12, pid=39%.
  
  
 0.568
MTH_837
UDP-N-acetylglucosamine 2-epimerase; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, pir:LN:G64487 AC:G64487, p()=3.2E-85, pid=38%.
 
   
 0.525
MTH_414
Asparagine synthetase; Function Code:5.01 - L-Amino Acid Metabolism, Alanine--aspartate and glutamate metabolism; similar to, sp:LN:ASNH_METJA AC:Q58516, p()=6.4E-73, pid=39%.
 
     0.508
MTH_1472
O-antigen transporter homolog; Function Code:12.02 - Cell Processes, Transport of carbohydrates organic acids alcohols and lipids; similar to, sp:LN:SP5B_BACSU, p()=7.10E-06, pid=%.
 
  
 0.497
MTH_547
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:g1881240 LN:AB001488, p()=2E-28, pid=28%.
     
 0.481
MTH_339
Unknown; Function Code:14.00 - Unknown; similar to, sp:LN:YHDT_ECOLI AC:P45566, p()=0.7, pid=03%.
       0.480
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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