STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_348Rhamnosyl transferase; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, gp:GI:g557194, p()=0.000000023, pid=21%. (313 aa)    
Predicted Functional Partners:
MTH_344
UDP-galactopyranose mutase; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, sp:LN:GLF_MYCPN AC:P75499, p()=3.3E-51, pid=32%.
 
  
 0.854
MTH_347
O-antigen transporter; Function Code:12.02 - Cell Processes, Transport of carbohydrates organic acids alcohols and lipids; similar to, gp:GI:g1736727 LN:D90841, p()=4.1E-53, pid=28%.
 
  
 0.758
MTH_345
Pyruvate formate-lyase 2 activating enzyme; Function Code:1.08 - Carbohydrate Metabolism, Pyruvate and acetyl-CoA metabolism; similar to, gp:GI:g1787045 LN:ECAE000184, p()=2.7E-31, pid=28%.
     
 0.604
MTH_346
Formate acetyltransferase 2; Function Code:1.08 - Carbohydrate Metabolism, Pyruvate and acetyl-CoA metabolism; similar to, sp:LN:PFLD_ECOLI AC:P32674, p()=3.7E-21, pid=23%.
       0.603
MTH_342
Succinoglycan biosynthesis transport protein; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, gp:GI:g1314563 LN:SSU51197, p()=3E-11, pid=20%.
 
  
 0.575
MTH_343
Rhamnosyl transferase; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, gp:GI:g765062, p()=1.8E-18, pid=27%.
 
    
0.517
MTH_349
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:g1857365 LN:OTU80287, p()=0.41, pid=07%.
       0.497
MTH_350
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, sp:LN:YPZ4_METTF AC:P29576, p()=0.000098, pid=18%.
       0.497
MTH_172
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:g1666509 LN:LIU61226, p()=8.6E-16, pid=23%.
  
     0.470
MTH_572
Polysaccharide biosynthesis protein; Function Code:11.02 - Cell envelope, Surface polysaccharides and lipopolysaccharides; similar to, sp:LN:SPSK_BACSU AC:P39631, p()=1.5E-16, pid=34%.
 
  
 0.467
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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