STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_361Teichoic acid biosynthesis protein RodC related protein; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, sp:LN:TAGB_BACSU AC:P27621, p()=1.1E-12, pid=15%. (369 aa)    
Predicted Functional Partners:
MTH_362
Capsular polysaccharide biosynthesis protein; Function Code:11.02 - Cell envelope, Surface polysaccharides and lipopolysaccharides; similar to, pir:LN:B64432 AC:B64432, p()=7.7E-27, pid=20%.
 
  
 0.834
MTH_369
UDP-N-acetylglucosamine pyrophosphorylase related protein; Function Code:4.03 - Nucleotide Metabolism, Nucleotide sugars metabolism; similar to, pir:LN:D64437 AC:D64437, p()=0.00000091, pid=21%.
 
  
 0.774
MTH_1792
dTDP-4-dehydrorhamnose reductase; Function Code:1.05 - Carbohydrate Metabolism, Fructose and mannose metabolism; similar to, gp:GI:g1881547 LN:SPU09239, p()=8.7E-51, pid=39%.
  
  
 0.579
MTH_360
Sensory transduction histidine kinase; Function Code:12.12 - Cell Processes, Broad regulatory functions; similar to, gp:GI:g1652472 LN:D90905, p()=8.8E-35, pid=12%.
       0.530
MTH_1789
dTDP-glucose 4,6-dehydratase; Function Code:1.05 - Carbohydrate Metabolism, Fructose and mannose metabolism; similar to, gp:GI:g1666507 LN:LIU61226, p()=7.5E-100, pid=56%.
  
  
 0.508
ribL
Autotrophic growth protein; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme.
 
  
 0.479
MTH_590
N-acetylglucosamine-1-phosphate transferase; Function Code:11.02 - Cell envelope, Surface polysaccharides and lipopolysaccharides; similar to, pir:LN:H64438 AC:H64438, p()=4.4E-40, pid=27%.
 
 
 0.436
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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