STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_393NADH dehydrogenase (ubiquinone), subunit 1 related protein; Function Code:2.01 - Energy Metabolism, Oxidative phosphorylation; similar to, pir:LN:H64364 AC:H64364, p()=6.8E-67, pid=46%. (287 aa)    
Predicted Functional Partners:
MTH_397
Formate hydrogenlyase, subunit 7; Function Code:2.02 - Energy Metabolism, Methane metabolism; similar to, pir:LN:D64364 AC:D64364, p()=3.8E-50, pid=63%.
 
 
 0.988
MTH_398
Formate hydrogenlyase, subunit 5; Function Code:2.02 - Energy Metabolism, Methane metabolism; similar to, pir:LN:C64364 AC:C64364, p()=8.5E-92, pid=46%.
 
 
 0.981
MTH_1239
Formate hydrogenlyase, subunit 7; Function Code:2.02 - Energy Metabolism, Methane metabolism; similar to, pir:LN:B64470 AC:B64470, p()=9.7E-52, pid=64%.
 
 
 0.977
MTH_1246
NADH dehydrogenase I, subunit N; Function Code:2.01 - Energy Metabolism, Oxidative phosphorylation; similar to, pir:LN:D64463 AC:D64463, p()=8.1E-68, pid=33%.
 
 
 0.977
MTH_1238
Formate hydrogenlyase, subunit 5; Function Code:2.02 - Energy Metabolism, Methane metabolism; similar to, pir:LN:B64428 AC:B64428, p()=2E-99, pid=47%.
 
 
 0.961
MTH_1240
Ferredoxin-like protein; Function Code:2.08 - Energy Metabolism, Electron transport; similar to, pir:LN:E64462 AC:E64462, p()=1.2E-30, pid=38%.
  
 
 0.947
MTH_1243
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:B64463 AC:B64463, p()=3E-25, pid=38%.
 
   0.908
MTH_391
NADH dehydrogenase I, subunit N related protein; Function Code:2.01 - Oxidative phosphorylation; similar to, pir:LN:B64365 AC:B64365, p()=1.8E-25, pid=31%.
  
  
 0.901
MTH_1251
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:A64419 AC:A64419, p()=3.2E-21, pid=47%.
 
 
 
 0.897
MTH_1244
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:B64463 AC:B64463, p()=0.00000046, pid=22%.
  
   0.827
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.