STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_400Polyferredoxin; Function Code:2.08 - Energy Metabolism, Electron transport; similar to, sp:LN:NRFC_HAEIN AC:P45015, p()=0.00071, pid=10%. (108 aa)    
Predicted Functional Partners:
MTH_399
Polyferredoxin; Function Code:2.08 - Energy Metabolism, Electron transport; similar to, gp:GI:e286616:g1747410, p()=4.8E-17, pid=13%.
  
  
 0.933
MTH_396
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:E64364 AC:E64364, p()=2.8E-15, pid=32%.
  
    0.891
MTH_405
Polyferredoxin; Function Code:2.08 - Energy Metabolism, Electron transport; similar to, pir:LN:B64364 AC:B64364, p()=3.9E-55, pid=92%.
  
    0.870
MTH_401
Polyferredoxin; Function Code:2.08 - Energy Metabolism, Electron transport; similar to, pir:LN:C37777 AC:C37777, p()=1.1E-24, pid=165%.
       0.773
MTH_402
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:e1226:g1364210, p()=0.8, pid=04%.
       0.773
MTH_397
Formate hydrogenlyase, subunit 7; Function Code:2.02 - Energy Metabolism, Methane metabolism; similar to, pir:LN:D64364 AC:D64364, p()=3.8E-50, pid=63%.
  
    0.764
MTH_395
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:F64364 AC:F64364, p()=1.6E-12, pid=33%.
  
    0.719
MTH_398
Formate hydrogenlyase, subunit 5; Function Code:2.02 - Energy Metabolism, Methane metabolism; similar to, pir:LN:C64364 AC:C64364, p()=8.5E-92, pid=46%.
  
    0.658
MTH_391
NADH dehydrogenase I, subunit N related protein; Function Code:2.01 - Oxidative phosphorylation; similar to, pir:LN:B64365 AC:B64365, p()=1.8E-25, pid=31%.
  
    0.535
MTH_389
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:D64365 AC:D64365, p()=1.2E-46, pid=54%.
  
    0.531
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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