STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_406Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:C64425 AC:C64425, p()=7E-49, pid=44%. (211 aa)    
Predicted Functional Partners:
MTH_405
Polyferredoxin; Function Code:2.08 - Energy Metabolism, Electron transport; similar to, pir:LN:B64364 AC:B64364, p()=3.9E-55, pid=92%.
 
     0.853
MTH_399
Polyferredoxin; Function Code:2.08 - Energy Metabolism, Electron transport; similar to, gp:GI:e286616:g1747410, p()=4.8E-17, pid=13%.
 
     0.707
MTH_393
NADH dehydrogenase (ubiquinone), subunit 1 related protein; Function Code:2.01 - Energy Metabolism, Oxidative phosphorylation; similar to, pir:LN:H64364 AC:H64364, p()=6.8E-67, pid=46%.
 
   
 0.623
MTH_1237
NADH dehydrogenase (ubiquinone), subunit 1 related protein; Function Code:2.01 - Energy Metabolism, Oxidative phosphorylation; similar to, pir:LN:A64470 AC:A64470, p()=2.1E-47, pid=33%.
 
   
 0.570
MTH_401
Polyferredoxin; Function Code:2.08 - Energy Metabolism, Electron transport; similar to, pir:LN:C37777 AC:C37777, p()=1.1E-24, pid=165%.
 
     0.566
MTH_404
Ribokinase; Function Code:1.03 - Carbohydrate Metabolism, Pentose phosphate cycle; similar to, sp:LN:RBSK_HAEIN AC:P44331, p()=1.1E-20, pid=27%; Belongs to the carbohydrate kinase PfkB family.
 
     0.565
MTH_1241
Polyferredoxin; Function Code:2.08 - Energy Metabolism, Electron transport; similar to, pir:LN:F64462 AC:F64462, p()=6.3E-80, pid=134%.
  
     0.562
MTH_1914
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, sp:LN:Y158_METJA AC:Q57622, p()=2.4E-71, pid=43%.
 
     0.556
ehaS
Formylmethanofuran:tetrahydromethanopterin formyltransferase II; Function Code:2.02 - Energy Metabolism, Methane metabolism; similar to, sp:LN:FTR_METTH AC:P21348, p()=1.6E-44, pid=36%; Belongs to the FTR family.
       0.507
MTH_1497
Cobyrinic acid a,c-diamide synthase related protein; Function Code:9.10 - Metabolism of Cofactors and Vitamins, Porphyrin and chlorophyll metabolism; similar to, sp:LN:Y138_METJA AC:Q57602, p()=7.1E-72, pid=36%.
  
     0.478
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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