STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_411Cadmium efflux ATPase; Function Code:12.11 - Cell Processes, Detoxification; similar to, sp:LN:CADA_STAAU AC:P20021, p()=1.9E-93, pid=34%. (605 aa)    
Predicted Functional Partners:
MTH_410
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:g662108 LN:HHU13194, p()=0.79, pid=20%.
       0.773
MTH_1795
Transcriptional regulator; Function Code:10.02 - Metabolism of Macromolecules, Transcription--mRNA synthesis and modification (includes regulators); similar to, gp:GI:g495647, p()=1.1E-18, pid=23%.
 
  
 0.664
MTH_409
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:g1652090 LN:D90902, p()=0.12, pid=10%.
       0.597
MTH_1893
Cation efflux system protein (zinc/cadmium); Function Code:12.11 - Cell Processes, Detoxification; similar to, pir:LN:A64356 AC:A64356, p()=1.8E-36, pid=19%.
 
 
 0.434
MTH_899
Transcriptional regulator; Function Code:10.02 - Metabolism of Macromolecules, Transcription--mRNA synthesis and modification (includes regulators); similar to, pir:LN:D64465 AC:D64465, p()=1.6E-17, pid=33%.
  
  
 0.406
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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